High-Protein Bagel Bites

These high-protein bagel bites pack all the satisfaction of a classic bagel shop breakfast into a wholesome bite-sized snack. They use simple ingredients and deliver a creamy, savory center in every golden bite. Whether you are meal prepping for busy mornings or bringing a protein-powered twist to brunch, these bagel bites are sure to become a new favorite in your kitchen.

My first batch disappeared from the cooling rack in under 10 minutes. Now these are my go-to weekend bake for family brunches or road trip snacks because they hold up so well.

Ingredients

• All-purpose gluten-free flour: gives your dough structure and a classic bagel chew choose a blend with xanthan gum for best texture
• Baking powder: helps the bites rise and get that bakery-style fluff make sure yours is fresh for good lift
• Unflavored protein powder: boosts the protein content without overpowering flavor look for a fine-grained, neutral tasting variety
• Pinch of salt: rounds out the flavors and brings out savory notes
• Plain unsweetened Greek yogurt: adds moisture and extra protein full-fat gives a softer foldable dough
• Cream cheese: provides the creamy classic bagel filling check labels for a thick block style for less melting and better bite
• Egg for wash: helps form a glossy golden crust you can skip this for egg-free
• Everything But The Bagel seasoning: gives that signature finish look for a mix with sesame and poppy seeds for extra crunch

Instructions

Mix Dry Ingredients:

Combine gluten-free flour, baking powder, protein powder, and salt in a large bowl. Whisk thoroughly to evenly distribute the baking powder and avoid any salty pockets. This step ensures you get a light and uniform dough.

Form the Dough:

Add Greek yogurt to the dry mixture. Use a sturdy spatula or your hands to mix until a sticky dough forms. Do not overwork or the bites will get dense. The dough should hold together but feel tacky.

Portion and Shape:

Lightly dust your countertop with extra flour. Transfer the dough and roll into a thick log. Use a knife or bench scraper to divide the dough into ten equal pieces for even baking.

Fill Each Bite:

Flatten each dough ball gently in your palm to form a small disk. Place one teaspoon of cold cream cheese in the center. Pinch the edges together until the filling is sealed inside and roll back into a ball. Work quickly to keep the cream cheese firm.

Top and Prep for Baking:

Arrange the filled balls on a parchment lined or greased plate. Brush each with beaten egg or spritz with oil for shine and crunch. Sprinkle generously with Everything But The Bagel seasoning covering the tops well for extra flavor.

Air Fry the Bagel Bites:

Preheat your air fryer to 350 degrees for at least five minutes. Place the bites in the basket leaving a small gap between each for crisping. Do not overcrowd. Air fry for five to six minutes until puffed and golden brown, rotating the basket if needed for even color.

Cool and Enjoy:

Let the bagel bites cool for two to three minutes so the filling sets. They are best enjoyed slightly warm when the cream cheese is still creamy inside. Serve as is or with a favorite dipping sauce.

The tang of Greek yogurt gives the dough a signature soft bite, and it is always the ingredient my husband guesses when he takes his first bite. I remember the first time my niece helped roll them she laughed at the dough sticking to her fingers and wanted to decorate the tops with extra seeds just for fun.

Storage Tips

These bagel bites stay fresh in an airtight container in the fridge for up to three days. They reheat perfectly in the air fryer for two to three minutes to bring back that crisp exterior. For longer storage, freeze baked and cooled bites on a baking sheet then transfer to a zip bag for up to three months.

Ingredient Substitutions

Swap Greek yogurt for a thick coconut or oat yogurt to make these dairy-free. Any unflavored protein powder works as long as it does not have a chalky taste. If you have no Everything But The Bagel seasoning, make a simple mix with sesame seeds, poppy seeds, a little dried garlic, and flaky salt.

Serving Suggestions

Serve for breakfast along with hard-boiled eggs and fruit. These are also fun as game day snacks with a side of herby yogurt dip or as a protein-packed lunchbox addition for kids.

Cultural and Historical Context

Bagels originated in Eastern European Jewish communities as a symbol of good luck and family tradition. These mini bites keep the spirit alive in a modern, nutritious, and gluten-free twist that fits today’s busy routines.

Seasonal Adaptations

Add pumpkin spice seasoning for a fall twist
Use chive cream cheese for garden fresh flavor in spring
Top with sundried tomato and basil for summer gatherings

Success Stories

A friend once made these after a marathon training run and loved how well they refueled her muscles. Another reader shared her kids now look forward to these as their Friday afternoon treat and help with every step from rolling to sprinkling seeds.

Freezer Meal Conversion

Let bagel bites cool fully before freezing wrapped or in a container. They defrost best at room temperature for thirty minutes or in the toaster oven on low for that perfect soft inside and crisp outside.

Enjoy these bagel bites warm for a creamy center and golden crust. They are perfect for any meal or snack time and so easy to customize for every season.

Recipe FAQs

→ Can I use regular flour instead of gluten-free?

Yes, you can substitute regular all-purpose flour for gluten-free flour if preferred.

→ What protein powder works best?

Unflavored whey or plant-based protein blends well without altering flavor. Avoid flavored varieties.

→ Do I need to use egg wash?

Egg wash creates a glossy finish, but you may use oil spray for an egg-free option.

→ How do I store leftover bagel bites?

Allow them to cool, then store in an airtight container in the fridge. Reheat for best taste.

→ Is there a substitute for cream cheese?

Try Greek yogurt or a plant-based spread as an alternative filling for a similar creamy texture.